- https://pubmed.ncbi.nlm.nih.gov/37207341/Abalign: a comprehensive multiple sequence alignment platform for ...
Jul 5, 2023 ... The utilization of high-throughput sequencing (HTS) for B-cell receptor (BCR) immune repertoire analysis has become widespread in the fields ...
- https://academic.oup.com/nar/article/51/W1/W17/7173809Abalign: a comprehensive multiple sequence alignment platform for ...
May 19, 2023 ... Abstract. The utilization of high-throughput sequencing (HTS) for B-cell receptor (BCR) immune repertoire analysis has become widespread in ...
- https://pubmed.ncbi.nlm.nih.gov/29944754/iReceptor: A platform for querying and analyzing antibody/B-cell and ...
Next-generation sequencing allows the characterization of the adaptive immune receptor repertoire (AIRR) in exquisite detail. These large-scale AIRR-seq ...
- https://academic.oup.com/gpb/article/22/4/qzae013/7603970TCRosetta: An Integrated Analysis and Annotation Platform for T-cell ...
Clustering similar CDR3 sequences is therefore essential for identifying cancer-associated receptors. GIANA is the best tool for clustering large-scale TCR ...
- https://pmc.ncbi.nlm.nih.gov/articles/PMC9494237/B-cell receptor repertoire sequencing: Deeper digging into the ...
... sequencing data from lymphocyte recombination, (Duez et al., 2016). bcRep, 2016, R, a platform for advanced analyses of B cell receptor repertoires, (Bischof ...
- https://www.science.org/doi/10.1126/sciadv.adk3060T-FINDER: A highly sensitive, pan-HLA platform for functional T cell ...
Feb 2, 2024 ... Here, we present T-FINDER [T cell Functional Identification and (Neo)-antigen Discovery of Epitopes and Receptors], a system to rapidly ...
- https://www.nature.com/articles/s41590-024-02059-6Integrating single-cell RNA and T cell/B cell receptor sequencing ...
Jan 29, 2025 ... ... sequencing (2 × 150 bp) on the Illumina HiSeq2500 platform. The Cell Ranger V(D)J pipeline (10× Genomics, v.3.0.2) was used to mark the TCR ...
- https://www.science.org/doi/10.1126/science.adp2407Disease diagnostics using machine learning of B cell and T cell ...
Feb 21, 2025 ... A framework, Mal-ID (machine learning for immunological diagnosis), to interpret the variable sequences of B and T cell receptors (BCRs and TCRs) from human ...
- https://www.adaptivebiotech.com/adaptive-immunosequencing/Adaptive Immunosequencing - Adaptive Biotech
Our sophisticated bioinformatics platform corrects errors and collapses ... This unique tool is based on T-cell receptor sequencing data generated from ...
- https://bmcimmunol.biomedcentral.com/articles/10.1186/s12865-014-0029-0Capturing needles in haystacks: a comparison of B-cell receptor ...
Aug 5, 2014 ... The combined per-base error-rate for the RT-PCR and sequencing process for the 454 and MiSeq platforms were similar to other studies (1.74x10−4 ...